OnPay vs QuickBooks Payroll Comparison: Reviews, Features, Pricing & Alternatives in 2026

Detailed side-by-side comparison to help you choose the right solution for your team

Updated Apr 2026 8 min read

OnPay

0.0 (0 reviews)

OnPay is a cloud-based payroll and HR software providing small businesses with automated tax filings, integrated benefits administration, and personnel management tools to streamline back-office operations and ensure compliance.

Starting at $40/mo
Free Trial 30 days
VS

QuickBooks Payroll

0.0 (0 reviews)

QuickBooks Payroll is a comprehensive automated tax and compensation management software providing small to mid-sized businesses with integrated tools to pay employees, manage benefits, and file taxes accurately.

Starting at $45/mo
Free Trial 30 days

Quick Comparison

Feature OnPay QuickBooks Payroll
Website onpay.com quickbooks.intuit.com
Pricing Model Subscription Subscription
Starting Price $40/month $45/month
FREE Trial ✓ 30 days free trial ✓ 30 days free trial
Free Plan ✘ No free plan ✘ No free plan
Product Demo ✓ Request demo here ✓ Request demo here
Deployment cloud mobile saas mobile
Integrations QuickBooks Online Xero FreshBooks Deputy When I Work TSheets Guideline Vestwell PosterElite Human Interest QuickBooks Online TSheets SimplyInsured Guideline Mineral Amazon PayPal Shopify Square Expensify
Target Users small-business mid-market small-business mid-market
Target Industries
Customer Count 0 0
Founded Year 2011 1983
Headquarters Atlanta, USA Mountain View, USA

Overview

O

OnPay

OnPay is a comprehensive payroll and HR solution designed to take the complexity out of managing your team. You can run unlimited payroll cycles for employees and contractors, while the platform automatically handles all federal, state, and local tax filings and payments. It simplifies your back-office by combining payroll, automated tax reporting, and HR tools into a single, intuitive interface that scales with your business needs.

Beyond just cutting checks, you can manage the entire employee lifecycle from digital onboarding to benefits administration. The platform integrates directly with popular accounting and time-tracking software to eliminate manual data entry. Whether you are a small business owner or a growing mid-sized company, you get access to licensed payroll experts and a guarantee that your tax filings are accurate and on time.

strtoupper($product2['name'][0])

QuickBooks Payroll

QuickBooks Payroll is an automated solution designed to take the stress out of paying your team. Whether you have one employee or a growing workforce, you can run payroll in minutes with integrated time tracking and automatic tax calculations. The platform handles your federal and state tax filings and payments automatically, helping you stay compliant without manual data entry.

You can manage your entire back office by syncing payroll data directly with QuickBooks Online accounting. This integration ensures your financial books stay balanced and up-to-date every time you run a pay cycle. Beyond just paychecks, you can offer your team health benefits, 401(k) plans, and workers' comp, all managed from a single dashboard that scales with your business needs.

Overview

O

OnPay Features

  • Full-Service Payroll Run unlimited payroll cycles for employees and contractors with automated tax filings and payments in all 50 states.
  • Digital Onboarding Invite new hires to enter their own details and sign documents electronically before their first day on the job.
  • Benefits Administration Manage health insurance, 401(k) plans, and workers' compensation directly within your payroll dashboard for seamless deductions.
  • HR Toolset Create custom offer letters, store personnel files securely, and track employee PTO with built-in HR management features.
  • Accounting Integrations Sync your payroll data automatically with QuickBooks, Xero, and FreshBooks to keep your financial books perfectly balanced.
  • Employee Self-Service Give your team lifetime access to their pay stubs, tax forms, and personal information through a dedicated mobile-friendly portal.
strtoupper($product2['name'][0])

QuickBooks Payroll Features

  • Auto Payroll. Set your payroll to run automatically each pay period so your team gets paid on time without you lifting a finger.
  • Automated Tax Filings. Let the software calculate, file, and pay your federal and state payroll taxes automatically to ensure year-round compliance.
  • Same-Day Direct Deposit. Keep your money longer and pay your employees faster with the ability to submit payroll on the very same day.
  • Integrated Time Tracking. Track employee hours and approve timesheets directly within the app to eliminate manual data entry and errors.
  • Health Benefits. Compare and choose medical, dental, and vision plans for your team with digital enrollment and automated deductions.
  • Workers' Comp Integration. Get quotes and manage your policies with a pay-as-you-go model that improves your business cash flow.
  • Expert Support. Access 24/7 premium support and even get a payroll setup review from a professional to ensure everything is correct.
  • HR Advisor Access. Consult with certified HR professionals to get custom handbooks and expert advice on complex hiring or termination issues.

Pricing Comparison

O

OnPay Pricing

Monthly Base
$40
  • Full-service payroll in 50 states
  • Automated tax filings and payments
  • HR software and document storage
  • Software integrations
  • Employee self-service accounts
Q

QuickBooks Payroll Pricing

Payroll Core
$45
  • Full-service automated payroll
  • Automated tax filings
  • Next-day direct deposit
  • Health health benefits
  • 401(k) plans
  • Expert product support

Pros & Cons

M

OnPay

Pros

  • Transparent flat-fee pricing with no hidden costs
  • Excellent customer support from licensed payroll professionals
  • Intuitive interface makes running payroll very fast
  • Seamless integration with popular accounting software
  • Handles complex multi-state payroll without extra fees

Cons

  • No native mobile app for administrators
  • Limited advanced reporting compared to enterprise tools
  • Lacks built-in native time tracking features
A

QuickBooks Payroll

Pros

  • Seamless integration with QuickBooks Online accounting
  • User-friendly interface is easy for non-accountants
  • Reliable automated tax filing and payments
  • Fast same-day direct deposit options
  • Mobile app allows payroll runs from anywhere

Cons

  • Per-employee fees can become expensive
  • Customer support wait times can be long
  • Occasional glitches when syncing with third-party apps
×

Please claim profile in order to edit product details and view analytics. Provide your work email @productdomain to receive a verification link.