Checkeeper vs QuickBooks Payroll Comparison: Reviews, Features, Pricing & Alternatives in 2026

Detailed side-by-side comparison to help you choose the right solution for your team

Updated Apr 2026 8 min read

Checkeeper

0.0 (0 reviews)

Checkeeper is a versatile online check printing software that allows you to design, print, and mail professional business checks from any device using your own printer and blank check stock.

Starting at $20/mo
Free Trial 14 days
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QuickBooks Payroll

0.0 (0 reviews)

QuickBooks Payroll is a comprehensive automated tax and compensation management software providing small to mid-sized businesses with integrated tools to pay employees, manage benefits, and file taxes accurately.

Starting at $45/mo
Free Trial 30 days

Quick Comparison

Feature Checkeeper QuickBooks Payroll
Website checkeeper.com quickbooks.intuit.com
Pricing Model Subscription Subscription
Starting Price $20/month $45/month
FREE Trial ✓ 14 days free trial ✓ 30 days free trial
Free Plan ✘ No free plan ✘ No free plan
Product Demo ✘ No product demo ✓ Request demo here
Deployment cloud mobile saas mobile
Integrations QuickBooks Online Xero FreshBooks Odoo Harvest Zoho Books Zapier Gusto Tiller QuickBooks Online TSheets SimplyInsured Guideline Mineral Amazon PayPal Shopify Square Expensify
Target Users solopreneur small-business small-business mid-market
Target Industries
Customer Count 0 0
Founded Year 2013 1983
Headquarters Orlando, USA Mountain View, USA

Overview

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Checkeeper

Checkeeper is a dedicated check printing solution designed to simplify how you handle outgoing payments. Instead of keeping expensive pre-printed checks for multiple bank accounts, you can use this platform to print professional checks on blank stock using any standard printer. It eliminates the need for manual data entry by syncing directly with your existing accounting tools, allowing you to manage your entire accounts payable process from a single dashboard.

You can choose to print checks yourself or use the built-in fulfillment service to have them printed and mailed for you. This flexibility makes it an ideal tool for small business owners, bookkeepers, and remote teams who need to issue payments quickly without being tied to a physical office. The software maintains a searchable digital registry of every check you create, ensuring your financial records stay organized and audit-ready at all times.

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QuickBooks Payroll

QuickBooks Payroll is an automated solution designed to take the stress out of paying your team. Whether you have one employee or a growing workforce, you can run payroll in minutes with integrated time tracking and automatic tax calculations. The platform handles your federal and state tax filings and payments automatically, helping you stay compliant without manual data entry.

You can manage your entire back office by syncing payroll data directly with QuickBooks Online accounting. This integration ensures your financial books stay balanced and up-to-date every time you run a pay cycle. Beyond just paychecks, you can offer your team health benefits, 401(k) plans, and workers' comp, all managed from a single dashboard that scales with your business needs.

Overview

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Checkeeper Features

  • Custom Template Designer Drag and drop elements to create professional check layouts that match your brand and align perfectly with your check stock.
  • Blank Check Printing Print secure checks on affordable blank check stock using any standard inkjet or laser printer you already own.
  • Automatic MICR Encoding Generate the required bank routing and account numbers in the specialized MICR font to ensure your checks pass bank clearing.
  • Check Mailing Service Let the fulfillment team print, stuff, and mail your checks via USPS so you never have to touch an envelope.
  • Secure Check Registry Access a complete, searchable history of every check issued to simplify your bank reconciliations and year-end tax preparation.
  • Multi-User Access Invite your bookkeeper or team members to create checks while maintaining control over permissions and approval workflows.
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QuickBooks Payroll Features

  • Auto Payroll. Set your payroll to run automatically each pay period so your team gets paid on time without you lifting a finger.
  • Automated Tax Filings. Let the software calculate, file, and pay your federal and state payroll taxes automatically to ensure year-round compliance.
  • Same-Day Direct Deposit. Keep your money longer and pay your employees faster with the ability to submit payroll on the very same day.
  • Integrated Time Tracking. Track employee hours and approve timesheets directly within the app to eliminate manual data entry and errors.
  • Health Benefits. Compare and choose medical, dental, and vision plans for your team with digital enrollment and automated deductions.
  • Workers' Comp Integration. Get quotes and manage your policies with a pay-as-you-go model that improves your business cash flow.
  • Expert Support. Access 24/7 premium support and even get a payroll setup review from a professional to ensure everything is correct.
  • HR Advisor Access. Consult with certified HR professionals to get custom handbooks and expert advice on complex hiring or termination issues.

Pricing Comparison

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Checkeeper Pricing

Monthly Subscription
$20
  • Unlimited check printing
  • Unlimited bank accounts
  • Unlimited user seats
  • Mobile and desktop access
  • Accounting software integrations
  • Secure MICR encoding
Q

QuickBooks Payroll Pricing

Payroll Core
$45
  • Full-service automated payroll
  • Automated tax filings
  • Next-day direct deposit
  • Health health benefits
  • 401(k) plans
  • Expert product support

Pros & Cons

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Checkeeper

Pros

  • Eliminates the need for multiple pre-printed check stocks
  • Integrates seamlessly with popular accounting software like QuickBooks
  • Very easy to set up and start printing
  • Mailing service saves significant time for remote teams

Cons

  • Mailing service costs extra per check sent
  • Interface feels basic compared to full accounting suites
  • Requires a printer with good alignment for MICR
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QuickBooks Payroll

Pros

  • Seamless integration with QuickBooks Online accounting
  • User-friendly interface is easy for non-accountants
  • Reliable automated tax filing and payments
  • Fast same-day direct deposit options
  • Mobile app allows payroll runs from anywhere

Cons

  • Per-employee fees can become expensive
  • Customer support wait times can be long
  • Occasional glitches when syncing with third-party apps
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